Python Assignment

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Assignment #1

  1. Load External Data
  2. Analyze Data
  3. Graph Data
  4. Save Data
  5. Comments throughout
  6. MS Word
    • Page 1- Loaded Data
    • Page 2...Graph or Graph
    • From last page... Analysis
  7. Loaded Data, Saved Data and the Python File
  • Flexibility with due date

Modules


RT-QPCR[1]

Installation

  1. In the Spyder console, type !pip install qpcr
  2. In the Spyder console, type !pip install seaborn
  3. In the Spyder console, type !pip install csvkit

Programs

  • Getting Started
  • Manual Data Analysis
    • Static
    • Static #2
    • Interactive #1
    • Interactive #2
  • Data analysis using a pipeline

References and Notes

  1. Auto-qPCR; a python-based web app for automated and reproducible analysis of qPCR data