PHRM 8010

Computer Programming

• Python Programming

Dr. Roberts' Assignments from Spring

• These are assignments that Dr. Roberts is responsible for. This does not apply to other lecturers in the course.

Assignment #1:

• You have two options:
  • 2022: Graphing and Data Analysis
  • 2023: 1-Graphing and Data Analysis.zip
    • This is slightly more work, but you learn more.
• You can do the project that is explained or something more detailed.

Assignment #2: NMR Simulator (10 out of 50 points)

• Dr. Zheng's part on organic chemistry = 25 points
• Dr. Bartlett's part on M.S. spectrometry = 15 points
• Dr. Robert's part with the NMR spectrometer simulator = 10 points
  • Questions on NMR without MestreS.docx: Questions #13 and #17 required the simulation software, so they will not count against you.

Assignment #3 (Chemoinformatics or Bioinformatics):

• You can choose between the following (You can use methods outside of the following):
  • 2022: Bioinformatics and Chemoinformatics
  • 2023: 3-Chemoinformatics.zip
    • If you want to learn about chemoinformatics, choose 3 different methods to analyze your small molecule.
    • If you want to learn about bioinformatics, choose 3 different methods to analyze your biologic drug.

Assignment #4: Molecular Modeling Project

• You can do this project on your drug and your biological target.

Assignment #5: Biologics-related presentation and discussion

• Dr. Kennedy's assignment. Ask Dr. Kennedy about that assignment.

NMR Challenge

1. Tutorials for the NMR challenge.
2. Small molecule NMR analysis of progesterone.
3. Small molecule NMR analysis of ubiquitin.

Capstone Presentation- Drugs and Targets

• Table of Drugs and Targets
  • You will have to pick a drug and a target. Each person will have a unique one. Please email it to me.

• Possible Outline for the Capstone Presentation
  • When possible, you can use your drug (small molecule or biologic) and your biological target for the assignments.

Potentially Useful Information

• I have had native speakers in Chinese (several) and Italian attest to the accuracy of DeepL Translate to translate English into their native languages.
• I have had a native speaker attest to the accuracy of Yandex to translate English into Arabic.
• For speaking text in various languages, AWS Polly seems to be the best.
• Chemical Class versus a Drug Class

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• Old Version of PHRM 8010 website